Development of an artificial intelligence method to detect COVID-19 pneumonia in computed tomography imagesGulsah Yildirim1, Hakki Muammer Karakas1, Yasar Alper Ozkaya2, Emre Sener2, Ozge Findik1, Gulhan Naz Pulat21University of Health Sciences, Istanbul Fatih Sultan Mehmet Training and Research Hospital, Department of Radiology 2Ankara University Technology Development Zone, Simplex Information Technologies, Inc
INTRODUCTION: This study was aimed to construct an artificial intelligence system to detect COVID-19 pneu-monia on computed tomography (CT) images and to test its diagnostic performance. METHODS: Data was acquired between March 18-April 17, 2020. CT data of 269 RT-PCR-proven patients were extracted and 173 studies (122 for training, 51 testing) were finally used. Most typical lesions of COVID-19 pneumonia were labeled by two radiologists using a custom tool to gen-erate multiplanar ground-truth masks. Using a patch size of 128x128 pixels, 18.255 axial, 71.458 coronal, and 72.721 sagittal patches were generated to train the datasets with the U-Net network. Lesions were extracted in orthogonal planes and filtered by lung segmentation. Sagittal and coronal predicted masks were reconverted to the axial plane and were merged into the inter-sect-ed axial mask using a voting scheme. RESULTS: Based on axial predicted masks, the sensitivity and specificity of the model were found as 91.4% and 99.9%, respectively. The total number of positive predictions has increased by 3.9% by the use of intersected predicted masks whereas the total number of negative predictions has only slightly decreased by 0.01%. These changes have resulted in 91.5% sensitivity, 99.9% specificity, and 99.9% accuracy. DISCUSSION AND CONCLUSION: This study has shown the reliability of the U-Net architecture in diagnosing typical pulmonary lesions of COVID-19 in CT images. It also showed the slightly favorable effect of the intersec-tion method to increase the model’s performance. Based on the performance level presented, the model may be used in the rapid and accurate detection and characterization of the typical COVID-19 pneumonia to assist radiologists.
Keywords: Computed tomography, Computer aided diagnosis, Convolutional neural networks, COVID-19, Deep learning, Machine learning, Pneumonia, U-Net.
Gulsah Yildirim, Hakki Muammer Karakas, Yasar Alper Ozkaya, Emre Sener, Ozge Findik, Gulhan Naz Pulat. Development of an artificial intelligence method to detect COVID-19 pneumonia in computed tomography images. . 2023; 24(1): 40-47
Sorumlu Yazar: Gulsah Yildirim, Türkiye |
|